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· Delarue web servers · PDB_Hydro Flow chart · Modify PDB structures · Fix missing side chains · Flip HNQ side chains · Refine sidechain torsions · Single point mutations · Change sequence (decorate) · Generate missing loops · Solvate PDB structures · Assign charges (PQR) · Run AquaSol · References · Homes/Links · Job queue status |
PDB FixerThis site provides facilities to mutate and change side-chains of a PDB file automatically. This will also allow for repairing missing side-chains in a PDB file, constructing polar hydrogen atoms and assigning partial charges for electrostatic calculations.
Warning: This suite of programs does not work well with multimers. Choose an option in the menu on the left and use the following flow chart as a guide... Flow chart |
Marc Delarue |
http://lorentz.dynstr.pasteur.fr Page last modified 16:48 May 02, 2016. |